BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029C10SP1|AL429042
(899 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1758 1738 0.0
>3x_Contig1758
Length = 25930
Score = 1738 bits (876), Expect = 0.0
Identities = 898/902 (99%), Gaps = 3/902 (0%)
Strand = Plus / Minus
Query: 1 tcgaggtcgctgaggatttctacatcattgtcgaggcttccgagaaagaattcattaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5245 tcgaggtcgctgaggatttctacatcattgtcgaggcttccgagaaagaattcattaaat 5186
Query: 61 gcaggaaatgatacgtcttccactgagggtttcaatcaaactgcaatgacaagggaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5185 gcaggaaatgatacgtcttccactgagggtttcaatcaaactgcaatgacaagggaagag 5126
Query: 121 aacactgatccattggg-ttcgaggttacgggtaagcg-ata-caaggcttctctatctg 177
||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 5125 aacactgatccattggggttcgaggttacgggtaagcgcatagcaaggcttctctatctg 5066
Query: 178 acgtaccatcaacgactctgttcaccaaattcaagtcttcgaaaagtgatagtgcgactc 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5065 acgtaccatcaacgactctgttcaccaaattcaagtcttcgaaaagtgatagtgcgactc 5006
Query: 238 ccgtaaagagtaagccagacgaatctgattccggcctcttttcatcgctaatatcggctg 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5005 ccgtaaagagtaagccagacgaatctgattccggcctcttttcatcgctaatatcggctg 4946
Query: 298 cacataacgctgctaaccatttgatacccaaaagttcactgaagagtagtagcagccttt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4945 cacataacgctgctaaccatttgatacccaaaagttcactgaagagtagtagcagccttt 4886
Query: 358 acgatgaaccgtccaatggagatagaactcagttgctgacttctggtattggtggtacag 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4885 acgatgaaccgtccaatggagatagaactcagttgctgacttctggtattggtggtacag 4826
Query: 418 atacaagtaatgatccatacaaccatacaggctcatttctgaatcatttagacttccttc 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4825 atacaagtaatgatccatacaaccatacaggctcatttctgaatcatttagacttccttc 4766
Query: 478 ttgctcccagctcgaataatgattatttactgaagaaggcgacgacactagacaccctta 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4765 ttgctcccagctcgaataatgattatttactgaagaaggcgacgacactagacaccctta 4706
Query: 538 ataccagcgactcctctacatcttccatttctcaacaaatgactaatccgtcttctaccg 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4705 ataccagcgactcctctacatcttccatttctcaacaaatgactaatccgtcttctaccg 4646
Query: 598 tgccgttatacgatgatagcgatcaagatggtaataacagtgatgatattggttctgtgg 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4645 tgccgttatacgatgatagcgatcaagatggtaataacagtgatgatattggttctgtgg 4586
Query: 658 gaactttcatggataaagtcaaatttacatcagtwaagcaagataatgcccccccaattt 717
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 4585 gaactttcatggataaagtcaaatttacatcagtaaagcaagataatgcccccccaattt 4526
Query: 718 cgacctttgggaggggaaatctaactttagatgccattgaaaaggacaaagatgatctca 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4525 cgacctttgggaggggaaatctaactttagatgccattgaaaaggacaaagatgatctca 4466
Query: 778 agtccaccggctttcatacaccaagtgtgctgattaccacagaccaaccagatcgaccgg 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4465 agtccaccggctttcatacaccaagtgtgctgattaccacagaccaaccagatcgaccgg 4406
Query: 838 tatcgtctccgtccccactctcaatgcctaatgatgatgcaaatacggacagcaatacaa 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4405 tatcgtctccgtccccactctcaatgcctaatgatgatgcaaatacggacagcaatacaa 4346
Query: 898 at 899
||
Sbjct: 4345 at 4344
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5699
Number of Sequences: 1807
Number of extensions: 5699
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)